Sanjiban Chakrabarty

PhD (Human Genetics)

Coordinator, Centre for DNA Repair and Genome Stability
Assistant Professor, Department of Cell and Molecular Biology, Manipal School of Life Sciences, Manipal

https://orcid.org/0000-0002-6018-8098

Planetarium Complex, Manipal, Karnataka State. Pin 576104
India

128 Citations
7 h-Index

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Research Output 2008 2019

128 Citations
7 h-Index
16 Article
3 Review article
1 Comment/debate
1 Letter
1 More
- 1 Short survey

22 results
Publication Year, Title (descending)

2019

Corrigendum to “Mitochondria in health and disease” (Mitochondrion (2018) 43 (25–29), (S1567724918301442), (10.1016/j.mito.2018.06.006))

Chakrabarty, S., Kabekkodu, S. P., Singh, R. P., Thangaraj, K., Singh, K. K. & Satyamoorthy, K., 01-07-2019, In : Mitochondrion. 47, 1 p.

Research output: Contribution to journal › Comment/debate

India

Mitochondria

Biological Science Disciplines

Cell Biology

Molecular Biology

Host and MTB genome encoded miRNA markers for diagnosis of tuberculosis

Chakrabarty, S., Kumar, A., Raviprasad, K., Mallya, S., Satyamoorthy, K. & Chawla, K., 01-05-2019, In : Tuberculosis. 116, p. 37-43 7 p.

Research output: Contribution to journal › Article

MicroRNAs

Mycobacterium tuberculosis

Tuberculosis

Genome

Pulmonary Tuberculosis

Whole mitochondria genome mutational spectrum in occupationally exposed lead subjects

Mani, M. S., Chakrabarty, S., Mallya, S. P., Kabekkodu, S. P., Jayaram, P., Varghese, V. K., Dsouza, H. S. & Satyamoorthy, K., 01-09-2019, In : Mitochondrion. 48, p. 60-66 7 p.

Research output: Contribution to journal › Article

Mitochondria

Genome

DNA

Mutation

Gene Order

2018

5 Citations (Scopus)

Clustered miRNAs and their role in biological functions and diseases

Kabekkodu, S. P., Shukla, V., Varghese, V. K., D' Souza, J., Chakrabarty, S. & Satyamoorthy, K., 01-11-2018, In : Biological Reviews. 93, 4, p. 1955-1986 32 p.

Research output: Contribution to journal › Article

MicroRNAs

microRNA

Genes

Multigene Family

Small Untranslated RNA

2 Citations (Scopus)

Genotypic detection of fluoroquinolone resistance in drug-resistant Mycobacterium tuberculosis at a tertiary care centre in south Coastal Karnataka, India

Chawla, K., Kumar, A., Shenoy, V. P., Chakrabarty, S. & Satyamoorthy, K., 01-06-2018, In : Journal of Global Antimicrobial Resistance. 13, p. 250-253 4 p.

Research output: Contribution to journal › Article

Multidrug-Resistant Tuberculosis

Fluoroquinolones

Mycobacterium tuberculosis

Tertiary Care Centers

India

6 Citations (Scopus)

Mitochondria in health and disease

Chakrabarty, S., Kabekkodu, S. P., Singh, R. P., Thangaraj, K., Singh, K. K. & Satyamoorthy, K., 01-01-2018, In : Mitochondrion.

Research output: Contribution to journal › Article

Mitochondria

Health

Mitochondrial Diseases

Translational Medical Research

India

2017

11 Citations (Scopus)

Aberrant gene-specific DNA methylation signature analysis in cervical cancer

Bhat, S., Kabekkodu, S. P., Varghese, V. K., Chakrabarty, S., Mallya, S. P., Rotti, H., Pandey, D., Kushtagi, P. & Satyamoorthy, K., 01-03-2017, In : Tumor Biology. 39, 3

Research output: Contribution to journal › Article

DNA Methylation

Uterine Cervical Neoplasms

5-Methylcytosine

Genes

Squamous Cell Carcinoma

5 Citations (Scopus)

Epigenomics, Pharmacoepigenomics, and Personalized Medicine in Cervical Cancer

Kabekkodu, S. P., Chakrabarty, S., Ghosh, S., Brand, A. & Satyamoorthy, K., 01-09-2017, In : Public Health Genomics. 20, 2, p. 100-115 16 p.

Research output: Contribution to journal › Review article

Precision Medicine

Epigenomics

Uterine Cervical Neoplasms

Histone Code

Untranslated RNA

2 Citations (Scopus)

Targeted sequencing-based analyses of candidate gene variants in ulcerative colitis-associated colorectal neoplasia

Chakrabarty, S., Varghese, V. K., Sahu, P., Jayaram, P., Shivakumar, B. M., Pai, C. G. & Satyamoorthy, K., 27-06-2017, In : British Journal of Cancer. 117, 1, p. 136-143 8 p.

Research output: Contribution to journal › Article

Genetic Association Studies

Ulcerative Colitis

Mutation

Colorectal Neoplasms

Neoplasms

2016

11 Citations (Scopus)

Comparative analysis of copy number variations in ulcerative colitis associated and sporadic colorectal neoplasia

Shivakumar, B. M., Chakrabarty, S., Rotti, H., Seenappa, V., Rao, L., Geetha, V., Tantry, B. V., Kini, H., Dharamsi, R., Pai, C. G. & Satyamoorthy, K., 14-04-2016, In : BMC Cancer. 16, 1, 271.

Research output: Contribution to journal › Article

Open Access

Ulcerative Colitis

Neoplasms

Colorectal Neoplasms

Real-Time Polymerase Chain Reaction

Immunohistochemistry

2 Citations (Scopus)

DNA methylation detection at single base resolution using targeted next generation bisulfite sequencing and cross validation using capillary sequencing

Bhat, S., Mallya, S., Varghese, V. K., Jayaram, P., Chakrabarty, S., Joshi, K. S., Nesari, T. M. & Satyamoorthy, K., 15-12-2016, In : Gene. 594, 2, p. 259-267 9 p.

Research output: Contribution to journal › Article

DNA Methylation

Genes

hydrogen sulfite

Genetic Association Studies

Biomarkers

1 Citation (Scopus)

Perspectives on translational genomics and public health in India

Chakrabarty, S., Kabekkodu, S. P., Brand, A. & Satyamoorthy, K., 01-04-2016, In : Public Health Genomics. 19, 2, p. 61-68 8 p.

Research output: Contribution to journal › Review article

Genomics

India

Public Health

Precision Medicine

Information Science

3 Citations (Scopus)

Spastizin mutation in hereditary spastic paraplegia with thin corpus callosum

Chakrabarty, S., Vijayakumar, N., Radhakrishnan, K. & Satyamoorthy, K., 01-10-2016, In : Journal of Neurology. 263, 10, p. 2130-2132 3 p.

Research output: Contribution to journal › Letter

2015

12 Citations (Scopus)

Copy number variations are progressively associated with the pathogenesis of colorectal cancer in ulcerative colitis

Shivakumar, B. M., Rotti, H., Vasudevan, T. G., Balakrishnan, A., Chakrabarty, S., Bhat, G., Rao, L., Pai, C. G. & Satyamoorthy, K., 14-01-2015, In : World Journal of Gastroenterology. 21, 2, p. 616-622 7 p.

Research output: Contribution to journal › Article

Ulcerative Colitis

Colorectal Neoplasms

Genes

Microsatellite Instability

Inborn Genetic Diseases

16 Citations (Scopus)

DNA methylation analysis of phenotype specific stratified Indian population

Rotti, H., Mallya, S., Kabekkodu, P. S., Chakrabarty, S., Bhale, S., Bharadwaj, R., Bhat, B. K., Dedge, A. P., Dhumal, R. V., Gangadharan, G. G., Gopinath, P. M., Govindaraj, P., Joshi, K. S., Kondaiah, P., Nair, S., Nair, S. N. S., Nayak, J., Prasanna, B. V., Shintre, P., Sule, M. & 4 others, Thangaraj, K., Patwardhan, B., Valiathan, V. M. & Satyamoorthy, K., 08-05-2015, In : Journal of Translational Medicine. 13, 1, 151.

Research output: Contribution to journal › Article

DNA Methylation

CpG Islands

Phenotype

Precision Medicine

Methylation

4 Citations (Scopus)

Effectiveness and safety of fixed dose combination of acarbose/metformin in Indian Type 2 diabetes patients: Results from observational GLOBE Study

behalf of GLOBE Investigators, 01-01-2015, In : Indian Journal of Endocrinology and Metabolism. 19, 1, p. 129-135 7 p.

Research output: Contribution to journal › Article

Acarbose

Metformin

Type 2 Diabetes Mellitus

Observational Studies

Safety

1 Citation (Scopus)

Genome Sequence of a Burkholderia pseudomallei clinical isolate from a patient with community-acquired pneumonia and septicemia

Mukhopadhyay, C., Vandana, K. E., Chaitanya, T. A. K., Shaw, T., Bhat, H. V., Chakrabarty, S., Paul, B., Mallya, S., Murali, T. S. & Satyamoorthy, K., 01-07-2015, In : Genome Announcements. 3, 4, e0091515.

Research output: Contribution to journal › Article

Burkholderia pseudomallei

Sepsis

Pneumonia

Genome

Melioidosis

11 Citations (Scopus)

Mitochondrial biology: From molecules to diseases

Kabekkodu, S. P., Chakrabarty, S., Shukla, V., Varghese, V. K., Singh, K. K., Thangaraj, K. & Satyamoorthy, K., 01-09-2015, In : Mitochondrion. 24, p. 93-98 6 p.

Research output: Contribution to journal › Short survey

India

Mitochondria

Mitochondrial Genes

Biological Science Disciplines

Energy Metabolism

2014

13 Citations (Scopus)

Upregulation of TFAM and mitochondria copy number in human lymphoblastoid cells

Chakrabarty, S., D'Souza, R. R., Kabekkodu, S. P., Gopinath, P. M., Rossignol, R. & Satyamoorthy, K., 2014, In : Mitochondrion. 15, 1, p. 52-58 7 p.

Research output: Contribution to journal › Article

Mitochondria

Up-Regulation

Mitochondrial DNA

Blood Cells

Intracellular Membranes

2012

4 Citations (Scopus)

Comprehensive DNA copy number profile and BAC library construction of an Indian individual

Chakrabarty, S., D'Souza, R. R., Bellampalli, R., Rotti, H., Saadi, A. V., Gopinath, P. M., Acharya, R. V., Govindaraj, P., Thangaraj, K. & Satyamoorthy, K., 01-06-2012, In : Gene. 500, 2, p. 186-193 8 p.

Research output: Contribution to journal › Article

Bacterial Artificial Chromosomes

Clone Cells

DNA

Genome

Ankyrin Repeat

2011

7 Citations (Scopus)

Methylation markers: A potential force driving cancer diagnostics forward

Khandige, S., Shanbhogue, V. V., Chakrabarty, S. & Kapettu, S., 2011, In : Oncology Research. 19, 3-4, p. 105-110 6 p.

Research output: Contribution to journal › Review article

Epigenomics

Methylation

DNA Methylation

Neoplasms

Research

2008

12 Citations (Scopus)

Antioxidants and lipid peroxidation in gestational diabetes - A preliminary study

Dey, P., Gupta, P., Acharya, N. K., Rao, S. N., Ray, S., Chakrabarty, S., Ramprasad, S., Kurian, T. A., Mawroh, A., Kundu, A., Bhaktha, G., Joseph, C. P., Kumar, P., Rai, L. & Rao, A., 04-2008, In : Indian Journal of Physiology and Pharmacology. 52, 2, p. 149-156 8 p.

Research output: Contribution to journal › Article

Gestational Diabetes

Lipid Peroxidation

Ceruloplasmin

Glutathione

Antioxidants