Characterizing methylation regulated miRNA in carcinoma of the human uterine cervix

Vinay Koshy Varghese, Vaibhav Shukla, Padacherri Vethil Jishnu, Shama Prasada Kabekkodu, Deeksha Pandey, Krishna Sharan, Kapaettu Satyamoorthy

Research output: Contribution to journalArticle

Abstract

Gene regulatory mechanisms determine the multistep carcinogenesis process. Two aspects of epigenetics are microRNA (miRNAs) and DNA methylation that regulate distinct biological mechanisms such as metastasis, apoptosis cell proliferation and induction of senescence. Although critical, the interplay between these two epigenetic mechanisms is yet to be completely understood, particularly in cervical cancer. To study the DNA methylation regulation of miRNAs and its potential role in cervical cancer, we investigated the differential methylation pattern of two candidate miRNAs (miR-375 and miR-196a-1) during cervical cancer progression against normal cervical epithelium (NCE) by bisulfite DNA sequencing. miR-375 and miR-196a-1 were hypermethylated in Squamous Cell Carcinoma (SCC) against NCE and Cervical Intra-Epithelial Neoplasia (CIN) (p < 0.05). Treatment with demethylating agent reactivated the miR-375 and miR-196a-1 expression in SiHa, HeLa and CaSki cells. In vitro artificial methylation by M.SssI followed by dual luciferase assay confirmed miR-375 and miR-196a-1 as methylation regulated miRNAs (P < 0.05). miR-375 and miR-196a-1 expression levels were negatively correlated with methylation levels in clinical specimens. We further identified Replication Factor C Subunit 3 (RFC3) and High Mobility Group AT-Hook 1 (HMGA1) as targets of miR-375 and miR-196a-1 respectively by dual luciferase reporter assay. Our analysis indicates that miR-375 and miR-196a-1 are DNA methylation regulated miRNAs whose deregulation may facilitate pathophysiology of cervical cancer.

Original languageEnglish
Article number116668
JournalLife Sciences
Volume232
DOIs
Publication statusPublished - 01-09-2019

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Methylation
MicroRNAs
Cervix Uteri
Uterine Cervical Neoplasms
Carcinoma
DNA Methylation
Luciferases
Epigenomics
Assays
AT-Hook Motifs
Epithelium
Replication Protein C
Deregulation
Hooks
Cell proliferation
Regulator Genes
DNA Sequence Analysis
HeLa Cells
Squamous Cell Carcinoma
Carcinogenesis

All Science Journal Classification (ASJC) codes

  • Biochemistry, Genetics and Molecular Biology(all)
  • Pharmacology, Toxicology and Pharmaceutics(all)

Cite this

Varghese, Vinay Koshy ; Shukla, Vaibhav ; Jishnu, Padacherri Vethil ; Kabekkodu, Shama Prasada ; Pandey, Deeksha ; Sharan, Krishna ; Satyamoorthy, Kapaettu. / Characterizing methylation regulated miRNA in carcinoma of the human uterine cervix. In: Life Sciences. 2019 ; Vol. 232.
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Characterizing methylation regulated miRNA in carcinoma of the human uterine cervix. / Varghese, Vinay Koshy; Shukla, Vaibhav; Jishnu, Padacherri Vethil; Kabekkodu, Shama Prasada; Pandey, Deeksha; Sharan, Krishna; Satyamoorthy, Kapaettu.

In: Life Sciences, Vol. 232, 116668, 01.09.2019.

Research output: Contribution to journalArticle

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