TY - JOUR
T1 - Physicochemical, Interaction & Topological Descriptors vs. hMAO-A Inhibition of Aplysinopsin Analogs
T2 - A Boulevard to the Discovery of Semi-synthetic Anti-depression Agents
AU - Singla, Rajeev K.
AU - Ashraf, Ghulam Md
AU - Ganash, Magdah
AU - Varadaraj Bhat, G.
AU - Shen, Bairong
N1 - Funding Information:
This work was funded by the Deanship of Scientific Research (DSR), King Abdulaziz University, Jeddah, Saudi Arabia under grant no. (KEP-2-141-38). The authors, therefore, acknowledge with thanks DSR technical and financial support. This work was supported by the National Natural Science Foundation of China (32070671), the Covid-19 research projects of West China Hospital Sichuan University (Grant no. HX-2019-nCoV-057) as well as the regional innovation cooperation between Sichuan and Guangxi Provinces (2020YFQ0019).
Funding Information:
The authors acknowledge with thanks DSR, King Abdulaziz University, Jeddah, Saudi Arabia for technical and financial support. Authors are also thankful to the funding agencies, the National Natural Science Foundation of China, West China Hospital Sichuan University, and the regional innovation cooperation between Sichuan and Guangxi Provinces for proving financial support.
Publisher Copyright:
© 2021 Bentham Science Publishers.
PY - 2021
Y1 - 2021
N2 - Background: Depression, a neurological disorder, is globally the 4th leading cause of chronic disabilities in human beings. Objective: This study aimed to model a 2D-QSAR equation that can facilitate the researchers to design better aplysi-nopsin analogs with potent hMAO-A inhibition. Methods: Aplysinopsin analogs dataset were subjected to ADME assessment for drug-likeness suitability using StarDrop software before modeled equation. 2D-QSAR equations were generated using VLife MDS 4.6. Dataset was segregated into training and test set using different methodologies, followed by variable selection. Model develop-ment was done using principal component regression, partial least square regression, and multiple regression. Results: The dataset has successfully qualified the drug-likeness criteria in ADME simulation, with more than 90% of molecules cleared the ideal conditions, including intrinsic solubility, hydrophobicity, CYP3A4 2C9pKi, hERG pIC50, etc. 112 models were developed using multiparametric consideration of methodologies. The best six models were discussed with their extent of significance and prediction capabilities. ALP97 was emerged out as the most significant model out of all, with ~83% of the variance in the training set, the internal predictive ability of ~74%, while having the external predictive capability of ~79%. Conclusion: ADME assessment suggested that aplysinopsin analogs are worth investigating. Interaction among the descriptors in the way of summation or multiplication products are quite influential and yield significant 2D-QSAR models with good prediction efficiency. This model can be used to design a more potent hMAO-A inhibitor with an aplysinopsin scaffold, which can then contribute to the treatment of depression and other neurological disorders.
AB - Background: Depression, a neurological disorder, is globally the 4th leading cause of chronic disabilities in human beings. Objective: This study aimed to model a 2D-QSAR equation that can facilitate the researchers to design better aplysi-nopsin analogs with potent hMAO-A inhibition. Methods: Aplysinopsin analogs dataset were subjected to ADME assessment for drug-likeness suitability using StarDrop software before modeled equation. 2D-QSAR equations were generated using VLife MDS 4.6. Dataset was segregated into training and test set using different methodologies, followed by variable selection. Model develop-ment was done using principal component regression, partial least square regression, and multiple regression. Results: The dataset has successfully qualified the drug-likeness criteria in ADME simulation, with more than 90% of molecules cleared the ideal conditions, including intrinsic solubility, hydrophobicity, CYP3A4 2C9pKi, hERG pIC50, etc. 112 models were developed using multiparametric consideration of methodologies. The best six models were discussed with their extent of significance and prediction capabilities. ALP97 was emerged out as the most significant model out of all, with ~83% of the variance in the training set, the internal predictive ability of ~74%, while having the external predictive capability of ~79%. Conclusion: ADME assessment suggested that aplysinopsin analogs are worth investigating. Interaction among the descriptors in the way of summation or multiplication products are quite influential and yield significant 2D-QSAR models with good prediction efficiency. This model can be used to design a more potent hMAO-A inhibitor with an aplysinopsin scaffold, which can then contribute to the treatment of depression and other neurological disorders.
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U2 - 10.2174/1389200222666211015155014
DO - 10.2174/1389200222666211015155014
M3 - Article
C2 - 34779368
AN - SCOPUS:85122750415
VL - 22
SP - 905
EP - 915
JO - Current Drug Metabolism
JF - Current Drug Metabolism
SN - 1389-2002
IS - 11
ER -