TY - JOUR
T1 - Promising phytochemicals of traditional Himalayan medicinal plants against putative replication and transmission targets of SARS-CoV-2 by computational investigation
AU - Natesh, Jagadish
AU - Mondal, Priya
AU - Kaur, Bhavjot
AU - Abdul Salam, Abdul Ajees
AU - Kasilingam, Srikaa
AU - Meeran, Syed Musthapa
N1 - Funding Information:
JN acknowledges research fellowships from the DBT, Govt. of India. PM and BK acknowledge research fellowships from the UGC and CSIR, respectively. AAAS acknowledges the MAHE intramural research grant (MAHE/DREG/PhD/IMF/2019). We also acknowledge CSIR-CFTRI for the support and infrastructure facility.
Publisher Copyright:
© 2021 Elsevier Ltd
PY - 2021/6
Y1 - 2021/6
N2 - Background: Identification and repurposing of therapeutic and preventive strategies against COVID-19 are rapidly undergoing. Several medicinal plants from the Himalayan region have been traditionally used to treat various human disorders. Thus, in our current study, we intended to explore the potential ability of Himalayan medicinal plant (HMP) bioactives against COVID-19 using computational investigations. Methods: Molecular docking was performed against six crucial targets involved in the replication and transmission of SARS-CoV-2. About forty-two HMP bioactives were analyzed against these targets for their binding energy, molecular interactions, inhibition constant, and biological pathway enrichment analysis. Pharmacological properties and potential biological functions of HMP bioactives were predicted using the ADMETlab and PASS webserver respectively. Results: Our current investigation has demonstrated that the bioactives of HMPs potentially act against COVID-19. Docking results showed that several HMP bioactives had a superior binding affinity with SARS-CoV-2 essential targets like 3CLpro, PLpro, RdRp, helicase, spike protein, and human ACE2. Based on the binding energies, several bioactives were selected and analyzed for pathway enrichment studies. We have found that selected HMP bioactives may have a role in regulating immune and apoptotic pathways. Furthermore, these selected HMP bioactives have shown lower toxicity with pleiotropic biological activities, including anti-viral activities in predicting activity spectra for substances. Conclusions: Current study results can explore the possibility of HMPs as therapeutic agents against COVID-19.
AB - Background: Identification and repurposing of therapeutic and preventive strategies against COVID-19 are rapidly undergoing. Several medicinal plants from the Himalayan region have been traditionally used to treat various human disorders. Thus, in our current study, we intended to explore the potential ability of Himalayan medicinal plant (HMP) bioactives against COVID-19 using computational investigations. Methods: Molecular docking was performed against six crucial targets involved in the replication and transmission of SARS-CoV-2. About forty-two HMP bioactives were analyzed against these targets for their binding energy, molecular interactions, inhibition constant, and biological pathway enrichment analysis. Pharmacological properties and potential biological functions of HMP bioactives were predicted using the ADMETlab and PASS webserver respectively. Results: Our current investigation has demonstrated that the bioactives of HMPs potentially act against COVID-19. Docking results showed that several HMP bioactives had a superior binding affinity with SARS-CoV-2 essential targets like 3CLpro, PLpro, RdRp, helicase, spike protein, and human ACE2. Based on the binding energies, several bioactives were selected and analyzed for pathway enrichment studies. We have found that selected HMP bioactives may have a role in regulating immune and apoptotic pathways. Furthermore, these selected HMP bioactives have shown lower toxicity with pleiotropic biological activities, including anti-viral activities in predicting activity spectra for substances. Conclusions: Current study results can explore the possibility of HMPs as therapeutic agents against COVID-19.
UR - http://www.scopus.com/inward/record.url?scp=85105697198&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85105697198&partnerID=8YFLogxK
U2 - 10.1016/j.compbiomed.2021.104383
DO - 10.1016/j.compbiomed.2021.104383
M3 - Article
C2 - 33915361
AN - SCOPUS:85105697198
SN - 0010-4825
VL - 133
JO - Computers in Biology and Medicine
JF - Computers in Biology and Medicine
M1 - 104383
ER -